PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_00761.1_g00009.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 139aa    MW: 15836.9 Da    PI: 10.2042
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_00761.1_g00009.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.32.9e-071550439
                             XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39
                              k+ +rk +NRe+ArrsR++K++ ++   +++ +Le
  Rsa1.0_00761.1_g00009.1 15 EKKRKRKLSNRESARRSRLKKQKLMQDTINEISALE 50
                             5999*******************9987777766666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.5E-81178No hitNo description
SMARTSM003383.6E-71276IPR004827Basic-leucine zipper domain
PfamPF077165.1E-51453IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.141477IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.58E-61670No hitNo description
CDDcd147024.91E-101768No hitNo description
PROSITE patternPS0003601934IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MAIAEKTSSG SDIDEKKRKR KLSNRESARR SRLKKQKLMQ DTINEISALE RRIKENSERC  60
KVARRRLDSL ESENVVLRSE KTWLLGYVSD LENMMATTTL TLTHSGGDDE NVNAEIAVGL  120
DCRRGPWQHS LQSVASFKT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11421EKKRKRKL
21520KKRKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2325781e-140AC232578.1 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrS013H10, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013595315.17e-80PREDICTED: basic leucine zipper 1-like
SwissprotQ9FGX27e-71BZIP1_ARATH; Basic leucine zipper 1
TrEMBLA0A0D3DC748e-80A0A0D3DC74_BRAOL; Uncharacterized protein
STRINGBra010035.1-P1e-77(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM125812231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49450.14e-72basic leucine-zipper 1